About AGEA

An interactive relational atlas based on spatial correlations of gene expression data for thousands of genes in the Allen Mouse Brain Atlas.

Place crosshairs over a point of interest and use the three discovery tools to explore the genetic architecture of the brain:

• Correlation mode: visualize the degree of transcriptome similarity between a user-specified reference point and the rest of the brain
• Use the Find Genes button to retrieve a list of genes that mark a region of interest
• Clusters mode: view neural subdivisions based solely on gene expression profiles

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About the Allen Mouse Brain Atlas

• In situ hybridization image data with cellular-level resolution
• Anatomic reference atlas
• Advanced search and visualization tools
• Brain Explorer 3-D® viewer

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