ISH Data Reference Atlas AGEA Brain Explorer Supplementary Data API Documentation Help About
Information for BS, Brain stem
Coronal
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Atlas Levels: 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21

Parent of BS
Structure Label Structure Name Atlas Locations
Brain Basic cell groups and regions
Children of BS
BS [Brain stem]
HB [Hindbrain]
MY [Medulla]
MY-mot [Medulla, motor related]
AMB [Nucleus ambiguus]
LRN [Lateral reticular nucleus]
MDRN [Medullary reticular nucleus]
PGRN [Paragigantocellular reticular nucleus]
PHY [Perihypoglossal nuclei]
PPY [Parapyramidal nucleus]
VNC [Vestibular nuclei]
MY-sat [Medulla, behavioral state related]
MY-sen [Medulla, sensory related]
CN [Cochlear nuclei]
DCN [Dorsal column nuclei]
NTS [Nucleus of the solitary tract]
SPVO [Spinal nucleus of the trigeminal, oral part]
P [Pons]
P-mot [Pons, motor related]
P-sat [Pons, behavioral state related]
CS [Superior central nucleus raphé]
P-sen [Pons, sensory related]
NLL [Nucleus of the lateral lemniscus]
PB [Parabrachial nucleus]
PBl [Parabrachial nucleus, lateral division]
PBm [Parabrachial nucleus, medial division]
SOC [Superior olivary complex]
IB [Interbrain]
HY [Hypothalamus]
LZ [Hypothalamic lateral zone]
ZI [Zona incerta]
MEZ [Hypothalamic medial zone]
AHN [Anterior hypothalamic nucleus]
MBO [Mammillary body]
MM [Medial mammillary nucleus]
SUM [Supramammillary nucleus]
TM [Tuberomammillary nucleus]
MPN [Medial preoptic nucleus]
PVHd [Paraventricular hypothalamic nucleus, descending division]
VMH [Ventromedial hypothalamic nucleus]
PVR [Periventricular region]
DMH [Dorsomedial nucleus of the hypothalamus]
PVZ [Periventricular zone]
ASO [Accessory supraoptic group]
PVH [Paraventricular hypothalamic nucleus]
PVHm [Paraventricular hypothalamic nucleus, magnocellular division]
PVHpm [Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part]
PVHp [Paraventricular hypothalamic nucleus, parvicellular division]
TH [Thalamus]
DORpm [Thalamus, polymodal association cortex related]
ATN [Anterior group of the dorsal thalamus]
AM [Anteromedial nucleus]
EPI [Epithalamus]
GENv [Geniculate group, ventral thalamus]
LGv [Ventral part of the lateral geniculate complex]
ILM [Intralaminar nuclei of the dorsal thalamus]
LAT [Lateral group of the dorsal thalamus]
MED [Medial group of the dorsal thalamus]
MD [Mediodorsal nucleus of thalamus]
MTN [Midline group of the dorsal thalamus]
DORsm [Thalamus, sensory-motor cortex related]
GENd [Geniculate group, dorsal thalamus]
MG [Medial geniculate complex]
SPF [Subparafascicular nucleus]
VENT [Ventral group of the dorsal thalamus]
VP [Ventral posterior complex of the thalamus]
VPM [Ventral posteromedial nucleus of the thalamus]
MB [Midbrain]
MBmot [Midbrain, motor related]
MRN [Midbrain reticular nucleus]
PAG [Periaqueductal gray]
PRT [Pretectal region]
SCm [Superior colliculus, motor related]
SCig [Superior colliculus, motor related, intermediate gray layer]
MBsen [Midbrain, sensory related]
IC [Inferior colliculus]
SCs [Superior colliculus, sensory related]
MBsta [Midbrain, behavioral state related]
RAmb [Midbrain raphe nuclei]
Other Structures at the Same Node
Structure Label Structure Name Atlas Locations
CB Cerebellum
CH Cerebrum
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